Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm4Q7TN37 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm4Q7TN37 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.33■□□□□ 0.85
Trpm4Q7TN37 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm4Q7TN37 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm4Q7TN37 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
Trpm4Q7TN37 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm4Q7TN37 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Trpm4Q7TN37 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trpm4Q7TN37 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.33■□□□□ 0.84
Trpm4Q7TN37 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.32■□□□□ 0.84
Trpm4Q7TN37 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm4Q7TN37 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trpm4Q7TN37 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Gm18284-201ENSMUST00000172604 624 ntBASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm4Q7TN37 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.28■□□□□ 0.84
Trpm4Q7TN37 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trpm4Q7TN37 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm4Q7TN37 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trpm4Q7TN37 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Trpm4Q7TN37 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.26■□□□□ 0.83
Trpm4Q7TN37 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trpm4Q7TN37 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm4Q7TN37 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.24■□□□□ 0.83
Trpm4Q7TN37 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms