Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.21■□□□□ 0.19
Vma21Q78T54 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.21■□□□□ 0.19
Vma21Q78T54 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vma21Q78T54 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Vma21Q78T54 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Vma21Q78T54 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vma21Q78T54 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vma21Q78T54 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vma21Q78T54 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vma21Q78T54 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Vma21Q78T54 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vma21Q78T54 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vma21Q78T54 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.2■□□□□ 0.18
Vma21Q78T54 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Vma21Q78T54 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vma21Q78T54 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vma21Q78T54 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vma21Q78T54 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vma21Q78T54 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vma21Q78T54 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vma21Q78T54 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vma21Q78T54 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vma21Q78T54 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.19■□□□□ 0.18
Vma21Q78T54 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.19■□□□□ 0.18
Vma21Q78T54 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vma21Q78T54 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vma21Q78T54 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vma21Q78T54 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vma21Q78T54 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.19■□□□□ 0.18
Vma21Q78T54 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vma21Q78T54 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vma21Q78T54 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.18■□□□□ 0.18
Vma21Q78T54 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vma21Q78T54 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vma21Q78T54 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vma21Q78T54 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vma21Q78T54 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.17■□□□□ 0.18
Vma21Q78T54 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vma21Q78T54 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.17■□□□□ 0.18
Vma21Q78T54 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vma21Q78T54 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.17■□□□□ 0.18
Vma21Q78T54 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vma21Q78T54 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vma21Q78T54 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vma21Q78T54 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
Vma21Q78T54 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Vma21Q78T54 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vma21Q78T54 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vma21Q78T54 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.15■□□□□ 0.18
Vma21Q78T54 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Vma21Q78T54 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vma21Q78T54 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vma21Q78T54 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.15■□□□□ 0.18
Vma21Q78T54 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vma21Q78T54 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms