Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cspg5Q71M36 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cspg5Q71M36 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cspg5Q71M36 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cspg5Q71M36 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.53■□□□□ 0.88
Cspg5Q71M36 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg5Q71M36 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg5Q71M36 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg5Q71M36 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg5Q71M36 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg5Q71M36 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cspg5Q71M36 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg5Q71M36 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.53■□□□□ 0.88
Cspg5Q71M36 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg5Q71M36 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg5Q71M36 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cspg5Q71M36 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.5■□□□□ 0.87
Cspg5Q71M36 Gm27011-201ENSMUST00000182352 972 ntBASIC20.5■□□□□ 0.87
Cspg5Q71M36 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cspg5Q71M36 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cspg5Q71M36 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.48■□□□□ 0.87
Cspg5Q71M36 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg5Q71M36 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg5Q71M36 Gm37179-201ENSMUST00000194862 823 ntBASIC20.48■□□□□ 0.87
Cspg5Q71M36 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.48■□□□□ 0.87
Cspg5Q71M36 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg5Q71M36 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cspg5Q71M36 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cspg5Q71M36 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg5Q71M36 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cspg5Q71M36 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Gm43530-201ENSMUST00000195920 274 ntBASIC20.46■□□□□ 0.87
Cspg5Q71M36 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Gm18671-201ENSMUST00000214826 683 ntBASIC20.46■□□□□ 0.87
Cspg5Q71M36 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cspg5Q71M36 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.45■□□□□ 0.86
Cspg5Q71M36 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cspg5Q71M36 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms