Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rif1Q6PR54 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rif1Q6PR54 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rif1Q6PR54 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.94■□□□□ 0.3
Rif1Q6PR54 Gm27275-201ENSMUST00000184318 272 ntBASIC16.94■□□□□ 0.3
Rif1Q6PR54 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rif1Q6PR54 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rif1Q6PR54 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.94■□□□□ 0.3
Rif1Q6PR54 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rif1Q6PR54 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rif1Q6PR54 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rif1Q6PR54 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rif1Q6PR54 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.92■□□□□ 0.3
Rif1Q6PR54 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.92■□□□□ 0.3
Rif1Q6PR54 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rif1Q6PR54 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.92■□□□□ 0.3
Rif1Q6PR54 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.92■□□□□ 0.3
Rif1Q6PR54 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rif1Q6PR54 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rif1Q6PR54 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rif1Q6PR54 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.9■□□□□ 0.3
Rif1Q6PR54 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.9■□□□□ 0.3
Rif1Q6PR54 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rif1Q6PR54 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rif1Q6PR54 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.89■□□□□ 0.29
Rif1Q6PR54 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.89■□□□□ 0.29
Rif1Q6PR54 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.89■□□□□ 0.29
Rif1Q6PR54 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.89■□□□□ 0.29
Rif1Q6PR54 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.89■□□□□ 0.29
Rif1Q6PR54 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.88■□□□□ 0.29
Rif1Q6PR54 Gm6659-201ENSMUST00000174752 547 ntBASIC16.88■□□□□ 0.29
Rif1Q6PR54 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rif1Q6PR54 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rif1Q6PR54 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rif1Q6PR54 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rif1Q6PR54 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Rif1Q6PR54 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rif1Q6PR54 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rif1Q6PR54 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rif1Q6PR54 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rif1Q6PR54 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.86■□□□□ 0.29
Rif1Q6PR54 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rif1Q6PR54 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rif1Q6PR54 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.85■□□□□ 0.29
Rif1Q6PR54 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rif1Q6PR54 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rif1Q6PR54 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rif1Q6PR54 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rif1Q6PR54 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rif1Q6PR54 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Rif1Q6PR54 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.84■□□□□ 0.29
Rif1Q6PR54 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.84■□□□□ 0.29
Rif1Q6PR54 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.84■□□□□ 0.29
Rif1Q6PR54 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rif1Q6PR54 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms