Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srsf1Q6PDM2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srsf1Q6PDM2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Srsf1Q6PDM2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srsf1Q6PDM2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srsf1Q6PDM2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Srsf1Q6PDM2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Srsf1Q6PDM2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Srsf1Q6PDM2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srsf1Q6PDM2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Srsf1Q6PDM2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Srsf1Q6PDM2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srsf1Q6PDM2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srsf1Q6PDM2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srsf1Q6PDM2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.31■□□□□ 0.36
Srsf1Q6PDM2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Srsf1Q6PDM2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Srsf1Q6PDM2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srsf1Q6PDM2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srsf1Q6PDM2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srsf1Q6PDM2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Srsf1Q6PDM2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srsf1Q6PDM2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Srsf1Q6PDM2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 Gm6365-201ENSMUST00000054711 744 ntBASIC17.27■□□□□ 0.36
Srsf1Q6PDM2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srsf1Q6PDM2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srsf1Q6PDM2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srsf1Q6PDM2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.27■□□□□ 0.35
Srsf1Q6PDM2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srsf1Q6PDM2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srsf1Q6PDM2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Srsf1Q6PDM2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Srsf1Q6PDM2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.26■□□□□ 0.35
Srsf1Q6PDM2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srsf1Q6PDM2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Srsf1Q6PDM2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srsf1Q6PDM2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms