Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col11a2Q64739 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Col11a2Q64739 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.72■■□□□ 1.55
Col11a2Q64739 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a2Q64739 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.72■■□□□ 1.55
Col11a2Q64739 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a2Q64739 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.72■■□□□ 1.55
Col11a2Q64739 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a2Q64739 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a2Q64739 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.72■■□□□ 1.55
Col11a2Q64739 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Col11a2Q64739 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.71■■□□□ 1.55
Col11a2Q64739 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.71■■□□□ 1.55
Col11a2Q64739 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.71■■□□□ 1.55
Col11a2Q64739 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col11a2Q64739 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.7■■□□□ 1.54
Col11a2Q64739 Gm13146-201ENSMUST00000118508 780 ntBASIC24.7■■□□□ 1.54
Col11a2Q64739 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC24.7■■□□□ 1.54
Col11a2Q64739 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.7■■□□□ 1.54
Col11a2Q64739 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a2Q64739 Gm22240-201ENSMUST00000175225 82 ntBASIC24.69■■□□□ 1.54
Col11a2Q64739 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col11a2Q64739 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col11a2Q64739 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col11a2Q64739 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col11a2Q64739 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col11a2Q64739 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.69■■□□□ 1.54
Col11a2Q64739 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Col11a2Q64739 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col11a2Q64739 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col11a2Q64739 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.68■■□□□ 1.54
Col11a2Q64739 Gm5408-201ENSMUST00000197998 747 ntBASIC24.68■■□□□ 1.54
Col11a2Q64739 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col11a2Q64739 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col11a2Q64739 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Col11a2Q64739 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col11a2Q64739 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.67■■□□□ 1.54
Col11a2Q64739 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Col11a2Q64739 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col11a2Q64739 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col11a2Q64739 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.66■■□□□ 1.54
Col11a2Q64739 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col11a2Q64739 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col11a2Q64739 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col11a2Q64739 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Col11a2Q64739 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col11a2Q64739 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col11a2Q64739 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
Col11a2Q64739 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col11a2Q64739 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.65■■□□□ 1.54
Col11a2Q64739 Gm26524-201ENSMUST00000192339 390 ntBASIC24.65■■□□□ 1.54
Col11a2Q64739 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.65■■□□□ 1.54
Col11a2Q64739 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Col11a2Q64739 Gm13168-201ENSMUST00000121771 632 ntBASIC24.64■■□□□ 1.54
Col11a2Q64739 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Col11a2Q64739 Gm6211-202ENSMUST00000167849 925 ntBASIC24.64■■□□□ 1.54
Col11a2Q64739 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Col11a2Q64739 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Col11a2Q64739 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col11a2Q64739 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Col11a2Q64739 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Col11a2Q64739 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col11a2Q64739 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Col11a2Q64739 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col11a2Q64739 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col11a2Q64739 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.63■■□□□ 1.53
Col11a2Q64739 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
Col11a2Q64739 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.63■■□□□ 1.53
Col11a2Q64739 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.63■■□□□ 1.53
Col11a2Q64739 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.63■■□□□ 1.53
Col11a2Q64739 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col11a2Q64739 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a2Q64739 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a2Q64739 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.62■■□□□ 1.53
Col11a2Q64739 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC24.62■■□□□ 1.53
Col11a2Q64739 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a2Q64739 AC122769.4-201ENSMUST00000228166 901 ntBASIC24.62■■□□□ 1.53
Col11a2Q64739 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a2Q64739 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a2Q64739 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Col11a2Q64739 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Col11a2Q64739 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC24.61■■□□□ 1.53
Col11a2Q64739 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Col11a2Q64739 Gm8520-201ENSMUST00000186517 868 ntBASIC24.61■■□□□ 1.53
Col11a2Q64739 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
Col11a2Q64739 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Col11a2Q64739 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col11a2Q64739 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col11a2Q64739 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Col11a2Q64739 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.6■■□□□ 1.53
Col11a2Q64739 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col11a2Q64739 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms