Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VclQ64727 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
VclQ64727 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Mir7075-201ENSMUST00000184187 82 ntBASIC19.54■□□□□ 0.72
VclQ64727 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.54■□□□□ 0.72
VclQ64727 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VclQ64727 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VclQ64727 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VclQ64727 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.53■□□□□ 0.72
VclQ64727 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.53■□□□□ 0.72
VclQ64727 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VclQ64727 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VclQ64727 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VclQ64727 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VclQ64727 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VclQ64727 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
VclQ64727 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VclQ64727 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VclQ64727 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
VclQ64727 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VclQ64727 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VclQ64727 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VclQ64727 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VclQ64727 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VclQ64727 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VclQ64727 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VclQ64727 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
VclQ64727 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VclQ64727 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VclQ64727 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VclQ64727 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
VclQ64727 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VclQ64727 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VclQ64727 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VclQ64727 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VclQ64727 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.51■□□□□ 0.71
VclQ64727 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
VclQ64727 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
VclQ64727 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
VclQ64727 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VclQ64727 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VclQ64727 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VclQ64727 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VclQ64727 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VclQ64727 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VclQ64727 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
VclQ64727 Notumos-201ENSMUST00000151998 2659 ntBASIC19.48■□□□□ 0.71
VclQ64727 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.48■□□□□ 0.71
VclQ64727 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Gm8493-201ENSMUST00000196881 489 ntBASIC19.48■□□□□ 0.71
VclQ64727 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VclQ64727 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VclQ64727 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VclQ64727 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.47■□□□□ 0.71
VclQ64727 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VclQ64727 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VclQ64727 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
VclQ64727 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VclQ64727 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VclQ64727 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.46■□□□□ 0.71
VclQ64727 Gm6139-201ENSMUST00000079261 882 ntBASIC19.46■□□□□ 0.71
VclQ64727 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.46■□□□□ 0.71
VclQ64727 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.45■□□□□ 0.7
VclQ64727 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VclQ64727 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms