Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn4Q61418 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn4Q61418 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn4Q61418 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn4Q61418 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Clcn4Q61418 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Gm22238-201ENSMUST00000175222 88 ntBASIC18.26■□□□□ 0.51
Clcn4Q61418 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clcn4Q61418 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn4Q61418 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.25■□□□□ 0.51
Clcn4Q61418 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.25■□□□□ 0.51
Clcn4Q61418 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Clcn4Q61418 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn4Q61418 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Clcn4Q61418 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn4Q61418 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn4Q61418 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Clcn4Q61418 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn4Q61418 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn4Q61418 Gm9847-201ENSMUST00000052528 599 ntBASIC18.24■□□□□ 0.51
Clcn4Q61418 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn4Q61418 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Clcn4Q61418 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn4Q61418 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn4Q61418 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Clcn4Q61418 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn4Q61418 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn4Q61418 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn4Q61418 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn4Q61418 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn4Q61418 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn4Q61418 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Clcn4Q61418 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Clcn4Q61418 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Clcn4Q61418 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn4Q61418 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Clcn4Q61418 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn4Q61418 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.21■□□□□ 0.51
Clcn4Q61418 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn4Q61418 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn4Q61418 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clcn4Q61418 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn4Q61418 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn4Q61418 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn4Q61418 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.2■□□□□ 0.5
Clcn4Q61418 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn4Q61418 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn4Q61418 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn4Q61418 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn4Q61418 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn4Q61418 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Golph3-202ENSMUST00000226517 2359 ntBASIC18.19■□□□□ 0.5
Clcn4Q61418 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.19■□□□□ 0.5
Clcn4Q61418 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Clcn4Q61418 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn4Q61418 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Clcn4Q61418 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms