Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf4Q61112 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf4Q61112 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf4Q61112 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf4Q61112 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf4Q61112 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf4Q61112 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf4Q61112 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sdf4Q61112 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf4Q61112 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf4Q61112 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.18■□□□□ 0.82
Sdf4Q61112 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf4Q61112 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf4Q61112 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.17■□□□□ 0.82
Sdf4Q61112 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.17■□□□□ 0.82
Sdf4Q61112 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdf4Q61112 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sdf4Q61112 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.17■□□□□ 0.82
Sdf4Q61112 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdf4Q61112 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sdf4Q61112 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Sdf4Q61112 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdf4Q61112 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdf4Q61112 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sdf4Q61112 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sdf4Q61112 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf4Q61112 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sdf4Q61112 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.15■□□□□ 0.82
Sdf4Q61112 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf4Q61112 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf4Q61112 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf4Q61112 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf4Q61112 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf4Q61112 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sdf4Q61112 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf4Q61112 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sdf4Q61112 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.14■□□□□ 0.81
Sdf4Q61112 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdf4Q61112 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sdf4Q61112 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sdf4Q61112 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.14■□□□□ 0.81
Sdf4Q61112 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.14■□□□□ 0.81
Sdf4Q61112 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sdf4Q61112 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.13■□□□□ 0.81
Sdf4Q61112 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Sdf4Q61112 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdf4Q61112 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sdf4Q61112 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sdf4Q61112 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.12■□□□□ 0.81
Sdf4Q61112 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.12■□□□□ 0.81
Sdf4Q61112 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf4Q61112 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.11■□□□□ 0.81
Sdf4Q61112 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Sdf4Q61112 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.11■□□□□ 0.81
Sdf4Q61112 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdf4Q61112 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.1■□□□□ 0.81
Sdf4Q61112 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdf4Q61112 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.1■□□□□ 0.81
Sdf4Q61112 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sdf4Q61112 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdf4Q61112 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdf4Q61112 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sdf4Q61112 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdf4Q61112 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.1■□□□□ 0.81
Sdf4Q61112 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.1■□□□□ 0.81
Sdf4Q61112 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Sdf4Q61112 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdf4Q61112 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf4Q61112 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf4Q61112 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf4Q61112 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf4Q61112 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf4Q61112 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf4Q61112 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf4Q61112 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 326.7 ms