Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.32■□□□□ 0.68
Trpc1Q61056 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpc1Q61056 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpc1Q61056 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpc1Q61056 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpc1Q61056 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpc1Q61056 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpc1Q61056 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpc1Q61056 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpc1Q61056 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.31■□□□□ 0.68
Trpc1Q61056 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trpc1Q61056 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpc1Q61056 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpc1Q61056 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.3■□□□□ 0.68
Trpc1Q61056 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpc1Q61056 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpc1Q61056 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.3■□□□□ 0.68
Trpc1Q61056 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trpc1Q61056 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpc1Q61056 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpc1Q61056 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpc1Q61056 Golph3-202ENSMUST00000226517 2359 ntBASIC19.29■□□□□ 0.68
Trpc1Q61056 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trpc1Q61056 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.29■□□□□ 0.68
Trpc1Q61056 Gm14117-201ENSMUST00000122417 843 ntBASIC19.29■□□□□ 0.68
Trpc1Q61056 Gm9959-201ENSMUST00000068277 390 ntBASIC19.29■□□□□ 0.68
Trpc1Q61056 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpc1Q61056 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trpc1Q61056 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trpc1Q61056 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpc1Q61056 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.28■□□□□ 0.68
Trpc1Q61056 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.28■□□□□ 0.68
Trpc1Q61056 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.28■□□□□ 0.68
Trpc1Q61056 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpc1Q61056 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpc1Q61056 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpc1Q61056 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpc1Q61056 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpc1Q61056 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trpc1Q61056 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpc1Q61056 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpc1Q61056 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trpc1Q61056 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpc1Q61056 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpc1Q61056 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.26■□□□□ 0.67
Trpc1Q61056 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trpc1Q61056 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trpc1Q61056 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trpc1Q61056 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trpc1Q61056 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trpc1Q61056 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trpc1Q61056 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.24■□□□□ 0.67
Trpc1Q61056 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.24■□□□□ 0.67
Trpc1Q61056 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.24■□□□□ 0.67
Trpc1Q61056 Gm45102-201ENSMUST00000207427 857 ntBASIC19.24■□□□□ 0.67
Trpc1Q61056 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.24■□□□□ 0.67
Trpc1Q61056 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trpc1Q61056 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trpc1Q61056 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trpc1Q61056 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trpc1Q61056 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trpc1Q61056 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Trpc1Q61056 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trpc1Q61056 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trpc1Q61056 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trpc1Q61056 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trpc1Q61056 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trpc1Q61056 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trpc1Q61056 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.23■□□□□ 0.67
Trpc1Q61056 Etf1-202ENSMUST00000180351 108 ntBASIC19.23■□□□□ 0.67
Trpc1Q61056 Gm10399-202ENSMUST00000202768 748 ntBASIC19.23■□□□□ 0.67
Trpc1Q61056 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Trpc1Q61056 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trpc1Q61056 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trpc1Q61056 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.23■□□□□ 0.67
Trpc1Q61056 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trpc1Q61056 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.22■□□□□ 0.67
Trpc1Q61056 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms