Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slc6a4Q60857 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.5■□□□□ 0.87
Slc6a4Q60857 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a4Q60857 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a4Q60857 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a4Q60857 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Slc6a4Q60857 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slc6a4Q60857 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a4Q60857 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a4Q60857 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a4Q60857 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a4Q60857 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slc6a4Q60857 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a4Q60857 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a4Q60857 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a4Q60857 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a4Q60857 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a4Q60857 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a4Q60857 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.46■□□□□ 0.87
Slc6a4Q60857 Gm43060-201ENSMUST00000200621 289 ntBASIC20.46■□□□□ 0.87
Slc6a4Q60857 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a4Q60857 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a4Q60857 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Slc6a4Q60857 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a4Q60857 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.46■□□□□ 0.87
Slc6a4Q60857 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a4Q60857 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Slc6a4Q60857 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Gm18284-201ENSMUST00000172604 624 ntBASIC20.45■□□□□ 0.86
Slc6a4Q60857 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a4Q60857 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a4Q60857 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a4Q60857 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a4Q60857 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a4Q60857 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a4Q60857 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Slc6a4Q60857 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a4Q60857 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a4Q60857 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a4Q60857 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a4Q60857 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Slc6a4Q60857 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.42■□□□□ 0.86
Slc6a4Q60857 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a4Q60857 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a4Q60857 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Slc6a4Q60857 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a4Q60857 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a4Q60857 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.41■□□□□ 0.86
Slc6a4Q60857 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a4Q60857 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a4Q60857 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a4Q60857 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a4Q60857 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Slc6a4Q60857 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Slc6a4Q60857 Gm8495-201ENSMUST00000188740 694 ntBASIC20.4■□□□□ 0.86
Slc6a4Q60857 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a4Q60857 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a4Q60857 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a4Q60857 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a4Q60857 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a4Q60857 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a4Q60857 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Slc6a4Q60857 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a4Q60857 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a4Q60857 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a4Q60857 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a4Q60857 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms