Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.55■□□□□ 0.88
Satb1Q60611 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Satb1Q60611 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Satb1Q60611 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Satb1Q60611 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.54■□□□□ 0.88
Satb1Q60611 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Satb1Q60611 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.54■□□□□ 0.88
Satb1Q60611 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Satb1Q60611 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Satb1Q60611 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Satb1Q60611 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.53■□□□□ 0.88
Satb1Q60611 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Satb1Q60611 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Satb1Q60611 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.53■□□□□ 0.88
Satb1Q60611 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Satb1Q60611 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.53■□□□□ 0.88
Satb1Q60611 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Satb1Q60611 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Satb1Q60611 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Satb1Q60611 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Satb1Q60611 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Satb1Q60611 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.52■□□□□ 0.88
Satb1Q60611 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Satb1Q60611 Gm10653-202ENSMUST00000139570 835 ntBASIC20.52■□□□□ 0.88
Satb1Q60611 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.52■□□□□ 0.88
Satb1Q60611 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.52■□□□□ 0.88
Satb1Q60611 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Satb1Q60611 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Satb1Q60611 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Satb1Q60611 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Satb1Q60611 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Satb1Q60611 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Satb1Q60611 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Satb1Q60611 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Satb1Q60611 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Satb1Q60611 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Satb1Q60611 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.51■□□□□ 0.87
Satb1Q60611 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.51■□□□□ 0.87
Satb1Q60611 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Satb1Q60611 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Satb1Q60611 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Satb1Q60611 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Satb1Q60611 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Satb1Q60611 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Satb1Q60611 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Satb1Q60611 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.5■□□□□ 0.87
Satb1Q60611 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.5■□□□□ 0.87
Satb1Q60611 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.5■□□□□ 0.87
Satb1Q60611 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.5■□□□□ 0.87
Satb1Q60611 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Satb1Q60611 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Satb1Q60611 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.5■□□□□ 0.87
Satb1Q60611 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Satb1Q60611 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Satb1Q60611 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Satb1Q60611 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Gm22240-201ENSMUST00000175225 82 ntBASIC20.49■□□□□ 0.87
Satb1Q60611 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.49■□□□□ 0.87
Satb1Q60611 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Satb1Q60611 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.48■□□□□ 0.87
Satb1Q60611 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Satb1Q60611 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
Satb1Q60611 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.47■□□□□ 0.87
Satb1Q60611 Gm7143-201ENSMUST00000222811 859 ntBASIC20.47■□□□□ 0.87
Satb1Q60611 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
Satb1Q60611 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms