Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim38Q5SZ99 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.66■□□□□ 0.9
Trim38Q5SZ99 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim38Q5SZ99 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim38Q5SZ99 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim38Q5SZ99 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim38Q5SZ99 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim38Q5SZ99 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
Trim38Q5SZ99 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim38Q5SZ99 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim38Q5SZ99 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim38Q5SZ99 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim38Q5SZ99 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim38Q5SZ99 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim38Q5SZ99 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim38Q5SZ99 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim38Q5SZ99 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim38Q5SZ99 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim38Q5SZ99 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim38Q5SZ99 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim38Q5SZ99 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim38Q5SZ99 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim38Q5SZ99 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim38Q5SZ99 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim38Q5SZ99 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Notumos-201ENSMUST00000151998 2659 ntBASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim38Q5SZ99 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim38Q5SZ99 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim38Q5SZ99 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim38Q5SZ99 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim38Q5SZ99 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim38Q5SZ99 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim38Q5SZ99 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim38Q5SZ99 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim38Q5SZ99 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim38Q5SZ99 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim38Q5SZ99 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim38Q5SZ99 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Trim38Q5SZ99 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.58■□□□□ 0.89
Trim38Q5SZ99 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim38Q5SZ99 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim38Q5SZ99 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim38Q5SZ99 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Trim38Q5SZ99 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim38Q5SZ99 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.56■□□□□ 0.88
Trim38Q5SZ99 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim38Q5SZ99 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms