Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Vps13aQ5H8C4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps13aQ5H8C4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps13aQ5H8C4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps13aQ5H8C4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Vps13aQ5H8C4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps13aQ5H8C4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps13aQ5H8C4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Vps13aQ5H8C4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Vps13aQ5H8C4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 Gm5408-201ENSMUST00000197998 747 ntBASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps13aQ5H8C4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps13aQ5H8C4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps13aQ5H8C4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Vps13aQ5H8C4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vps13aQ5H8C4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps13aQ5H8C4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps13aQ5H8C4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps13aQ5H8C4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps13aQ5H8C4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.09■□□□□ 0.81
Vps13aQ5H8C4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vps13aQ5H8C4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps13aQ5H8C4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps13aQ5H8C4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps13aQ5H8C4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps13aQ5H8C4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.08■□□□□ 0.81
Vps13aQ5H8C4 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.08■□□□□ 0.81
Vps13aQ5H8C4 Trmt13-210ENSMUST00000198454 880 ntBASIC20.08■□□□□ 0.81
Vps13aQ5H8C4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.08■□□□□ 0.81
Vps13aQ5H8C4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps13aQ5H8C4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps13aQ5H8C4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps13aQ5H8C4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
Vps13aQ5H8C4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps13aQ5H8C4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Vps13aQ5H8C4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vps13aQ5H8C4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps13aQ5H8C4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps13aQ5H8C4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps13aQ5H8C4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps13aQ5H8C4 Gm15565-201ENSMUST00000118890 427 ntBASIC20.05■□□□□ 0.8
Vps13aQ5H8C4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps13aQ5H8C4 Gm715-201ENSMUST00000117865 831 ntBASIC20.05■□□□□ 0.8
Vps13aQ5H8C4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms