Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Urb1Q571H0 Gm12441-201ENSMUST00000121806 588 ntBASIC18.34■□□□□ 0.53
Urb1Q571H0 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.34■□□□□ 0.53
Urb1Q571H0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Urb1Q571H0 Gm9988-201ENSMUST00000069786 435 ntBASIC18.34■□□□□ 0.53
Urb1Q571H0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Urb1Q571H0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Urb1Q571H0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Urb1Q571H0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.33■□□□□ 0.53
Urb1Q571H0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Urb1Q571H0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.33■□□□□ 0.53
Urb1Q571H0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Urb1Q571H0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Urb1Q571H0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.33■□□□□ 0.53
Urb1Q571H0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Urb1Q571H0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Urb1Q571H0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Urb1Q571H0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Urb1Q571H0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.33■□□□□ 0.52
Urb1Q571H0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Urb1Q571H0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Urb1Q571H0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Urb1Q571H0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.32■□□□□ 0.52
Urb1Q571H0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Urb1Q571H0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Urb1Q571H0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.32■□□□□ 0.52
Urb1Q571H0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Urb1Q571H0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.32■□□□□ 0.52
Urb1Q571H0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Urb1Q571H0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.32■□□□□ 0.52
Urb1Q571H0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Urb1Q571H0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Urb1Q571H0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Urb1Q571H0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Urb1Q571H0 Gm13234-201ENSMUST00000120010 747 ntBASIC18.31■□□□□ 0.52
Urb1Q571H0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.31■□□□□ 0.52
Urb1Q571H0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.31■□□□□ 0.52
Urb1Q571H0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.31■□□□□ 0.52
Urb1Q571H0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Urb1Q571H0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Urb1Q571H0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Urb1Q571H0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.31■□□□□ 0.52
Urb1Q571H0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.3■□□□□ 0.52
Urb1Q571H0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.3■□□□□ 0.52
Urb1Q571H0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Urb1Q571H0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.3■□□□□ 0.52
Urb1Q571H0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.29■□□□□ 0.52
Urb1Q571H0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.29■□□□□ 0.52
Urb1Q571H0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.29■□□□□ 0.52
Urb1Q571H0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
Urb1Q571H0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Urb1Q571H0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Urb1Q571H0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Urb1Q571H0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Urb1Q571H0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.28■□□□□ 0.52
Urb1Q571H0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Gm13148-201ENSMUST00000118892 745 ntBASIC18.28■□□□□ 0.52
Urb1Q571H0 Gm10653-202ENSMUST00000139570 835 ntBASIC18.28■□□□□ 0.52
Urb1Q571H0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Gm4968-201ENSMUST00000071458 858 ntBASIC18.28■□□□□ 0.52
Urb1Q571H0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Urb1Q571H0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Urb1Q571H0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.28■□□□□ 0.52
Urb1Q571H0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Urb1Q571H0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.27■□□□□ 0.52
Urb1Q571H0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Urb1Q571H0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms