Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Pds5bQ4VA53 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Pds5bQ4VA53 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Pds5bQ4VA53 AC115037.1-201ENSMUST00000223391 2173 ntBASIC35.71■■■■□ 3.31
Pds5bQ4VA53 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC35.71■■■■□ 3.31
Pds5bQ4VA53 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Pds5bQ4VA53 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Pds5bQ4VA53 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC35.7■■■■□ 3.31
Pds5bQ4VA53 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Pds5bQ4VA53 Gm10655-201ENSMUST00000098658 1397 ntBASIC35.69■■■■□ 3.3
Pds5bQ4VA53 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Pds5bQ4VA53 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Pds5bQ4VA53 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC35.68■■■■□ 3.3
Pds5bQ4VA53 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC35.68■■■■□ 3.3
Pds5bQ4VA53 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Pds5bQ4VA53 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Pds5bQ4VA53 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC35.67■■■■□ 3.3
Pds5bQ4VA53 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
Pds5bQ4VA53 Mir6236-201ENSMUST00000184437 123 ntBASIC35.67■■■■□ 3.3
Pds5bQ4VA53 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC35.67■■■■□ 3.3
Pds5bQ4VA53 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Pds5bQ4VA53 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Pds5bQ4VA53 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Pds5bQ4VA53 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Pds5bQ4VA53 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Pds5bQ4VA53 CT030146.1-201ENSMUST00000220919 217 ntBASIC35.66■■■■□ 3.3
Pds5bQ4VA53 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC35.66■■■■□ 3.3
Pds5bQ4VA53 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
Pds5bQ4VA53 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Pds5bQ4VA53 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Pds5bQ4VA53 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Pds5bQ4VA53 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Pds5bQ4VA53 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC35.65■■■■□ 3.3
Pds5bQ4VA53 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
Pds5bQ4VA53 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Pds5bQ4VA53 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC35.65■■■■□ 3.3
Pds5bQ4VA53 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC35.65■■■■□ 3.3
Pds5bQ4VA53 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Pds5bQ4VA53 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Pds5bQ4VA53 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Pds5bQ4VA53 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
Pds5bQ4VA53 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC35.63■■■■□ 3.29
Pds5bQ4VA53 Gm6420-201ENSMUST00000193885 723 ntBASIC35.62■■■■□ 3.29
Pds5bQ4VA53 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
Pds5bQ4VA53 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Pds5bQ4VA53 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC35.61■■■■□ 3.29
Pds5bQ4VA53 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
Pds5bQ4VA53 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
Pds5bQ4VA53 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Pds5bQ4VA53 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Pds5bQ4VA53 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC35.61■■■■□ 3.29
Pds5bQ4VA53 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
Pds5bQ4VA53 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Pds5bQ4VA53 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC35.6■■■■□ 3.29
Pds5bQ4VA53 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
Pds5bQ4VA53 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
Pds5bQ4VA53 AC153890.1-201ENSMUST00000220021 2469 ntBASIC35.59■■■■□ 3.29
Pds5bQ4VA53 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
Pds5bQ4VA53 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Pds5bQ4VA53 Krtap5-1-202ENSMUST00000188274 742 ntBASIC35.58■■■■□ 3.29
Pds5bQ4VA53 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC35.58■■■■□ 3.29
Pds5bQ4VA53 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC35.58■■■■□ 3.29
Pds5bQ4VA53 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC35.58■■■■□ 3.29
Pds5bQ4VA53 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Pds5bQ4VA53 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Pds5bQ4VA53 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC35.57■■■■□ 3.29
Pds5bQ4VA53 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
Pds5bQ4VA53 AC164883.3-201ENSMUST00000227396 1774 ntBASIC35.57■■■■□ 3.28
Pds5bQ4VA53 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC35.56■■■■□ 3.28
Pds5bQ4VA53 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Pds5bQ4VA53 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC35.56■■■■□ 3.28
Pds5bQ4VA53 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC35.55■■■■□ 3.28
Pds5bQ4VA53 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Pds5bQ4VA53 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC35.55■■■■□ 3.28
Pds5bQ4VA53 Gm13534-201ENSMUST00000121169 513 ntBASIC35.55■■■■□ 3.28
Pds5bQ4VA53 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC35.55■■■■□ 3.28
Pds5bQ4VA53 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
Pds5bQ4VA53 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC35.55■■■■□ 3.28
Pds5bQ4VA53 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC35.55■■■■□ 3.28
Pds5bQ4VA53 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Pds5bQ4VA53 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Pds5bQ4VA53 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Pds5bQ4VA53 Gm42418-201ENSMUST00000182010 1831 ntBASIC35.54■■■■□ 3.28
Pds5bQ4VA53 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Pds5bQ4VA53 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC35.54■■■■□ 3.28
Pds5bQ4VA53 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC35.53■■■■□ 3.28
Pds5bQ4VA53 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Pds5bQ4VA53 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC35.53■■■■□ 3.28
Pds5bQ4VA53 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Pds5bQ4VA53 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
Pds5bQ4VA53 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC35.53■■■■□ 3.28
Pds5bQ4VA53 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Pds5bQ4VA53 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Pds5bQ4VA53 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC35.52■■■■□ 3.28
Pds5bQ4VA53 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Pds5bQ4VA53 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
Pds5bQ4VA53 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC35.52■■■■□ 3.28
Pds5bQ4VA53 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
Pds5bQ4VA53 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC35.51■■■■□ 3.28
Pds5bQ4VA53 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms