Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.08■□□□□ 0.97
Syne3Q4FZC9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Syne3Q4FZC9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Syne3Q4FZC9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne3Q4FZC9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Gm13241-201ENSMUST00000094493 780 ntBASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne3Q4FZC9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Golgb1-201ENSMUST00000023534 498 ntBASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Syne3Q4FZC9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne3Q4FZC9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne3Q4FZC9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Syne3Q4FZC9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne3Q4FZC9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne3Q4FZC9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne3Q4FZC9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne3Q4FZC9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne3Q4FZC9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Syne3Q4FZC9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Syne3Q4FZC9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne3Q4FZC9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syne3Q4FZC9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne3Q4FZC9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne3Q4FZC9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syne3Q4FZC9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syne3Q4FZC9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.01■□□□□ 0.95
Syne3Q4FZC9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Syne3Q4FZC9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21■□□□□ 0.95
Syne3Q4FZC9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Syne3Q4FZC9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syne3Q4FZC9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne3Q4FZC9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms