Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lin28bQ45KJ6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lin28bQ45KJ6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lin28bQ45KJ6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lin28bQ45KJ6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lin28bQ45KJ6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.95■□□□□ 0.62
Lin28bQ45KJ6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lin28bQ45KJ6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lin28bQ45KJ6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lin28bQ45KJ6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Gm42642-201ENSMUST00000200683 355 ntBASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lin28bQ45KJ6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.93■□□□□ 0.62
Lin28bQ45KJ6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Mir6236-201ENSMUST00000184437 123 ntBASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Gm7291-201ENSMUST00000199147 382 ntBASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Gm42569-201ENSMUST00000200539 472 ntBASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lin28bQ45KJ6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.91■□□□□ 0.62
Lin28bQ45KJ6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lin28bQ45KJ6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lin28bQ45KJ6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lin28bQ45KJ6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lin28bQ45KJ6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms