Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.43■□□□□ 0.7
Rnf223Q3UV31 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf223Q3UV31 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf223Q3UV31 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.43■□□□□ 0.7
Rnf223Q3UV31 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf223Q3UV31 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Gm18284-201ENSMUST00000172604 624 ntBASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf223Q3UV31 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf223Q3UV31 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf223Q3UV31 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf223Q3UV31 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf223Q3UV31 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf223Q3UV31 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf223Q3UV31 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rnf223Q3UV31 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Rnf223Q3UV31 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf223Q3UV31 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Gm8495-201ENSMUST00000188740 694 ntBASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf223Q3UV31 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Rnf223Q3UV31 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf223Q3UV31 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.38■□□□□ 0.69
Rnf223Q3UV31 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf223Q3UV31 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf223Q3UV31 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf223Q3UV31 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf223Q3UV31 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf223Q3UV31 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.36■□□□□ 0.69
Rnf223Q3UV31 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf223Q3UV31 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf223Q3UV31 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf223Q3UV31 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf223Q3UV31 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf223Q3UV31 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Gm11421-201ENSMUST00000122124 294 ntBASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rnf223Q3UV31 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf223Q3UV31 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf223Q3UV31 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf223Q3UV31 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Rnf223Q3UV31 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rnf223Q3UV31 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf223Q3UV31 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Rnf223Q3UV31 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.33■□□□□ 0.68
Rnf223Q3UV31 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.33■□□□□ 0.68
Rnf223Q3UV31 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Rnf223Q3UV31 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rnf223Q3UV31 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf223Q3UV31 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms