Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Nlrc4Q3UP24 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.01■□□□□ 0.95
Nlrc4Q3UP24 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Spcs1-204ENSMUST00000226782 949 ntBASIC21■□□□□ 0.95
Nlrc4Q3UP24 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Gm6139-201ENSMUST00000079261 882 ntBASIC21■□□□□ 0.95
Nlrc4Q3UP24 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nlrc4Q3UP24 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nlrc4Q3UP24 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Nlrc4Q3UP24 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nlrc4Q3UP24 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.96■□□□□ 0.95
Nlrc4Q3UP24 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Gm43173-201ENSMUST00000202246 593 ntBASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nlrc4Q3UP24 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nlrc4Q3UP24 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms