Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.07■■□□□ 1.44
Col5a2Q3U962 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
Col5a2Q3U962 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.07■■□□□ 1.44
Col5a2Q3U962 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Col5a2Q3U962 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.06■■□□□ 1.44
Col5a2Q3U962 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Col5a2Q3U962 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col5a2Q3U962 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col5a2Q3U962 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col5a2Q3U962 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col5a2Q3U962 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col5a2Q3U962 Gm22325-201ENSMUST00000158904 308 ntBASIC24.02■■□□□ 1.44
Col5a2Q3U962 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Col5a2Q3U962 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col5a2Q3U962 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col5a2Q3U962 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col5a2Q3U962 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col5a2Q3U962 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col5a2Q3U962 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Col5a2Q3U962 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24■■□□□ 1.43
Col5a2Q3U962 Gm20049-201ENSMUST00000219950 730 ntBASIC24■■□□□ 1.43
Col5a2Q3U962 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24■■□□□ 1.43
Col5a2Q3U962 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24■■□□□ 1.43
Col5a2Q3U962 Gm43403-201ENSMUST00000198011 1786 ntBASIC24■■□□□ 1.43
Col5a2Q3U962 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Col5a2Q3U962 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col5a2Q3U962 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24■■□□□ 1.43
Col5a2Q3U962 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col5a2Q3U962 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col5a2Q3U962 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.99■■□□□ 1.43
Col5a2Q3U962 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC23.99■■□□□ 1.43
Col5a2Q3U962 Mir6236-201ENSMUST00000184437 123 ntBASIC23.99■■□□□ 1.43
Col5a2Q3U962 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Col5a2Q3U962 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Col5a2Q3U962 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Col5a2Q3U962 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Col5a2Q3U962 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
Col5a2Q3U962 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.98■■□□□ 1.43
Col5a2Q3U962 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Gm7290-201ENSMUST00000104990 617 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Gm12918-201ENSMUST00000120234 636 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Gm15710-201ENSMUST00000121821 636 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col5a2Q3U962 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Gm5075-201ENSMUST00000196916 622 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.97■■□□□ 1.43
Col5a2Q3U962 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.97■■□□□ 1.43
Col5a2Q3U962 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col5a2Q3U962 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col5a2Q3U962 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col5a2Q3U962 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col5a2Q3U962 Gm13168-201ENSMUST00000121771 632 ntBASIC23.95■■□□□ 1.42
Col5a2Q3U962 Mir7071-201ENSMUST00000184847 69 ntBASIC23.95■■□□□ 1.42
Col5a2Q3U962 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.95■■□□□ 1.42
Col5a2Q3U962 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col5a2Q3U962 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col5a2Q3U962 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.95■■□□□ 1.42
Col5a2Q3U962 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Col5a2Q3U962 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col5a2Q3U962 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms