Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cln6Q3U466 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cln6Q3U466 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cln6Q3U466 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.92■□□□□ 0.3
Cln6Q3U466 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cln6Q3U466 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Cln6Q3U466 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cln6Q3U466 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cln6Q3U466 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cln6Q3U466 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cln6Q3U466 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Cln6Q3U466 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.91■□□□□ 0.3
Cln6Q3U466 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.91■□□□□ 0.3
Cln6Q3U466 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cln6Q3U466 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln6Q3U466 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cln6Q3U466 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.9■□□□□ 0.3
Cln6Q3U466 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln6Q3U466 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cln6Q3U466 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.89■□□□□ 0.29
Cln6Q3U466 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cln6Q3U466 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.89■□□□□ 0.29
Cln6Q3U466 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cln6Q3U466 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cln6Q3U466 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.88■□□□□ 0.29
Cln6Q3U466 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cln6Q3U466 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.88■□□□□ 0.29
Cln6Q3U466 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.88■□□□□ 0.29
Cln6Q3U466 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.88■□□□□ 0.29
Cln6Q3U466 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln6Q3U466 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cln6Q3U466 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.87■□□□□ 0.29
Cln6Q3U466 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms