Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Q3U1D9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Gm11421-201ENSMUST00000122124 294 ntBASIC17.31■□□□□ 0.36
Q3U1D9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Q3U1D9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.31■□□□□ 0.36
Q3U1D9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.3■□□□□ 0.36
Q3U1D9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.3■□□□□ 0.36
Q3U1D9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.3■□□□□ 0.36
Q3U1D9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Q3U1D9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Q3U1D9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Q3U1D9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.29■□□□□ 0.36
Q3U1D9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.28■□□□□ 0.36
Q3U1D9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
Q3U1D9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.28■□□□□ 0.36
Q3U1D9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.28■□□□□ 0.36
Q3U1D9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Q3U1D9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Q3U1D9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.27■□□□□ 0.36
Q3U1D9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
Q3U1D9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.27■□□□□ 0.36
Q3U1D9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.27■□□□□ 0.36
Q3U1D9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.27■□□□□ 0.35
Q3U1D9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q3U1D9 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.26■□□□□ 0.35
Q3U1D9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3U1D9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q3U1D9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.26■□□□□ 0.35
Q3U1D9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Q3U1D9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Q3U1D9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3U1D9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Q3U1D9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.25■□□□□ 0.35
Q3U1D9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Q3U1D9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Q3U1D9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Q3U1D9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.25■□□□□ 0.35
Q3U1D9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Q3U1D9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.24■□□□□ 0.35
Q3U1D9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Q3U1D9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Q3U1D9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q3U1D9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Q3U1D9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms