Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Q3U1D9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3U1D9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Gm11421-201ENSMUST00000122124 294 ntBASIC17.31■□□□□ 0.36
Q3U1D9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Q3U1D9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.31■□□□□ 0.36
Q3U1D9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3U1D9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.3■□□□□ 0.36
Q3U1D9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.3■□□□□ 0.36
Q3U1D9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.3■□□□□ 0.36
Q3U1D9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Q3U1D9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3U1D9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Q3U1D9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Q3U1D9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3U1D9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.29■□□□□ 0.36
Q3U1D9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.28■□□□□ 0.36
Q3U1D9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
Q3U1D9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.28■□□□□ 0.36
Q3U1D9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.28■□□□□ 0.36
Q3U1D9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Q3U1D9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Q3U1D9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3U1D9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.27■□□□□ 0.36
Q3U1D9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
Q3U1D9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.27■□□□□ 0.36
Q3U1D9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3U1D9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.27■□□□□ 0.36
Q3U1D9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.27■□□□□ 0.35
Q3U1D9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q3U1D9 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.26■□□□□ 0.35
Q3U1D9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3U1D9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q3U1D9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.26■□□□□ 0.35
Q3U1D9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Q3U1D9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Q3U1D9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3U1D9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Q3U1D9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.25■□□□□ 0.35
Q3U1D9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Q3U1D9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Q3U1D9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Q3U1D9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.25■□□□□ 0.35
Q3U1D9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3U1D9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Q3U1D9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.24■□□□□ 0.35
Q3U1D9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Q3U1D9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Q3U1D9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q3U1D9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q3U1D9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Q3U1D9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms