Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lins1Q3U1D0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Gm26571-201ENSMUST00000181399 666 ntBASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lins1Q3U1D0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lins1Q3U1D0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Gm7291-201ENSMUST00000199147 382 ntBASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lins1Q3U1D0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.75■■□□□ 1.39
Lins1Q3U1D0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Gm42642-201ENSMUST00000200683 355 ntBASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lins1Q3U1D0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lins1Q3U1D0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Lins1Q3U1D0 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.73■■□□□ 1.39
Lins1Q3U1D0 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.73■■□□□ 1.39
Lins1Q3U1D0 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.73■■□□□ 1.39
Lins1Q3U1D0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Lins1Q3U1D0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lins1Q3U1D0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lins1Q3U1D0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lins1Q3U1D0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Gm29257-201ENSMUST00000186115 639 ntBASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Lins1Q3U1D0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
Lins1Q3U1D0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lins1Q3U1D0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lins1Q3U1D0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lins1Q3U1D0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lins1Q3U1D0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lins1Q3U1D0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms