Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Mir6236-201ENSMUST00000184437 123 ntBASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shcbp1lQ3TTP0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shcbp1lQ3TTP0 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.02■□□□□ 0.8
Shcbp1lQ3TTP0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shcbp1lQ3TTP0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shcbp1lQ3TTP0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shcbp1lQ3TTP0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shcbp1lQ3TTP0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Shcbp1lQ3TTP0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.02■□□□□ 0.79
Shcbp1lQ3TTP0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shcbp1lQ3TTP0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Shcbp1lQ3TTP0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Shcbp1lQ3TTP0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shcbp1lQ3TTP0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Shcbp1lQ3TTP0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shcbp1lQ3TTP0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shcbp1lQ3TTP0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.99■□□□□ 0.79
Shcbp1lQ3TTP0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.99■□□□□ 0.79
Shcbp1lQ3TTP0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shcbp1lQ3TTP0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shcbp1lQ3TTP0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shcbp1lQ3TTP0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Gm26833-201ENSMUST00000180899 440 ntBASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shcbp1lQ3TTP0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.97■□□□□ 0.79
Shcbp1lQ3TTP0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shcbp1lQ3TTP0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shcbp1lQ3TTP0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shcbp1lQ3TTP0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Shcbp1lQ3TTP0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shcbp1lQ3TTP0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shcbp1lQ3TTP0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.95■□□□□ 0.78
Shcbp1lQ3TTP0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms