Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q3KNL4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q3KNL4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q3KNL4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q3KNL4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Q3KNL4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.54■□□□□ 0.72
Q3KNL4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Q3KNL4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q3KNL4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Q3KNL4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q3KNL4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Q3KNL4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.53■□□□□ 0.72
Q3KNL4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.53■□□□□ 0.72
Q3KNL4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q3KNL4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Q3KNL4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q3KNL4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Q3KNL4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q3KNL4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q3KNL4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.52■□□□□ 0.71
Q3KNL4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q3KNL4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Q3KNL4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Q3KNL4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Q3KNL4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Q3KNL4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q3KNL4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q3KNL4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q3KNL4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.5■□□□□ 0.71
Q3KNL4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Q3KNL4 Gm7143-201ENSMUST00000222811 859 ntBASIC19.5■□□□□ 0.71
Q3KNL4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q3KNL4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Q3KNL4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q3KNL4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q3KNL4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q3KNL4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Q3KNL4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.49■□□□□ 0.71
Q3KNL4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.49■□□□□ 0.71
Q3KNL4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Q3KNL4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Q3KNL4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.49■□□□□ 0.71
Q3KNL4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q3KNL4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.48■□□□□ 0.71
Q3KNL4 Gm15820-201ENSMUST00000201566 728 ntBASIC19.48■□□□□ 0.71
Q3KNL4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q3KNL4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q3KNL4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Q3KNL4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q3KNL4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Q3KNL4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.47■□□□□ 0.71
Q3KNL4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Q3KNL4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Q3KNL4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q3KNL4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q3KNL4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q3KNL4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q3KNL4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q3KNL4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q3KNL4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Q3KNL4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q3KNL4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q3KNL4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q3KNL4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q3KNL4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q3KNL4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.45■□□□□ 0.7
Q3KNL4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.45■□□□□ 0.7
Q3KNL4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q3KNL4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Q3KNL4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q3KNL4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Q3KNL4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q3KNL4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q3KNL4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Q3KNL4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms