Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ush2AQ2QI47 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Gm9103-201ENSMUST00000119371 405 ntBASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 AC137127.1-201ENSMUST00000213466 1078 ntBASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ush2AQ2QI47 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ush2AQ2QI47 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ush2AQ2QI47 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.96□□□□□ -0.65
Ush2AQ2QI47 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Ush2AQ2QI47 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.96□□□□□ -0.65
Ush2AQ2QI47 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ush2AQ2QI47 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ush2AQ2QI47 Gm10655-201ENSMUST00000098658 1397 ntBASIC10.96□□□□□ -0.66
Ush2AQ2QI47 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ush2AQ2QI47 Gm17971-201ENSMUST00000190239 806 ntBASIC10.96□□□□□ -0.66
Ush2AQ2QI47 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ush2AQ2QI47 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ush2AQ2QI47 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ush2AQ2QI47 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.96□□□□□ -0.66
Ush2AQ2QI47 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Gm37563-201ENSMUST00000192580 1513 ntBASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ush2AQ2QI47 Mir1199-201ENSMUST00000117015 119 ntBASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Gm10698-201ENSMUST00000182663 604 ntBASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Mir5122-201ENSMUST00000175004 89 ntBASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Gm13146-201ENSMUST00000118508 780 ntBASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ush2AQ2QI47 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.93□□□□□ -0.66
Ush2AQ2QI47 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 AC122428.3-201ENSMUST00000215551 2290 ntBASIC10.93□□□□□ -0.66
Ush2AQ2QI47 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ush2AQ2QI47 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms