Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd8Q09XV5 Ank2-226ENSMUST00000189368 339 ntBASIC18.24■□□□□ 0.51
Chd8Q09XV5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.24■□□□□ 0.51
Chd8Q09XV5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd8Q09XV5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.24■□□□□ 0.51
Chd8Q09XV5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd8Q09XV5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Chd8Q09XV5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd8Q09XV5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Chd8Q09XV5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd8Q09XV5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.23■□□□□ 0.51
Chd8Q09XV5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd8Q09XV5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd8Q09XV5 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.22■□□□□ 0.51
Chd8Q09XV5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chd8Q09XV5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Chd8Q09XV5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd8Q09XV5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd8Q09XV5 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.21■□□□□ 0.51
Chd8Q09XV5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd8Q09XV5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd8Q09XV5 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.21■□□□□ 0.51
Chd8Q09XV5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd8Q09XV5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Chd8Q09XV5 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.21■□□□□ 0.51
Chd8Q09XV5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chd8Q09XV5 Mir1199-201ENSMUST00000117015 119 ntBASIC18.21■□□□□ 0.51
Chd8Q09XV5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Chd8Q09XV5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Chd8Q09XV5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.2■□□□□ 0.5
Chd8Q09XV5 Gm7461-201ENSMUST00000058918 827 ntBASIC18.2■□□□□ 0.5
Chd8Q09XV5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Gm26524-201ENSMUST00000192339 390 ntBASIC18.2■□□□□ 0.5
Chd8Q09XV5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd8Q09XV5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd8Q09XV5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd8Q09XV5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd8Q09XV5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd8Q09XV5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Chd8Q09XV5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd8Q09XV5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Chd8Q09XV5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd8Q09XV5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd8Q09XV5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 Mir5122-201ENSMUST00000175004 89 ntBASIC18.16■□□□□ 0.5
Chd8Q09XV5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.16■□□□□ 0.5
Chd8Q09XV5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Chd8Q09XV5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd8Q09XV5 Dio3-201ENSMUST00000097228 1449 ntBASIC18.16■□□□□ 0.5
Chd8Q09XV5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd8Q09XV5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.15■□□□□ 0.5
Chd8Q09XV5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd8Q09XV5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd8Q09XV5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chd8Q09XV5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.15■□□□□ 0.5
Chd8Q09XV5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chd8Q09XV5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.14■□□□□ 0.49
Chd8Q09XV5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd8Q09XV5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.14■□□□□ 0.49
Chd8Q09XV5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd8Q09XV5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
Chd8Q09XV5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd8Q09XV5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chd8Q09XV5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chd8Q09XV5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd8Q09XV5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd8Q09XV5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms