Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IhhP97812 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IhhP97812 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IhhP97812 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IhhP97812 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
IhhP97812 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IhhP97812 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.86■□□□□ 0.93
IhhP97812 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.85■□□□□ 0.93
IhhP97812 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IhhP97812 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
IhhP97812 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IhhP97812 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.85■□□□□ 0.93
IhhP97812 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IhhP97812 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IhhP97812 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IhhP97812 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IhhP97812 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.84■□□□□ 0.93
IhhP97812 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IhhP97812 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
IhhP97812 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IhhP97812 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
IhhP97812 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IhhP97812 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
IhhP97812 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IhhP97812 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
IhhP97812 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
IhhP97812 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
IhhP97812 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
IhhP97812 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
IhhP97812 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
IhhP97812 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.83■□□□□ 0.92
IhhP97812 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
IhhP97812 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
IhhP97812 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.82■□□□□ 0.92
IhhP97812 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
IhhP97812 Smad6-203ENSMUST00000179458 273 ntBASIC20.82■□□□□ 0.92
IhhP97812 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.82■□□□□ 0.92
IhhP97812 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IhhP97812 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
IhhP97812 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
IhhP97812 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IhhP97812 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IhhP97812 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IhhP97812 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IhhP97812 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.81■□□□□ 0.92
IhhP97812 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
IhhP97812 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.81■□□□□ 0.92
IhhP97812 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.81■□□□□ 0.92
IhhP97812 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.81■□□□□ 0.92
IhhP97812 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IhhP97812 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IhhP97812 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IhhP97812 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IhhP97812 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IhhP97812 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IhhP97812 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IhhP97812 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
IhhP97812 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IhhP97812 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
IhhP97812 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IhhP97812 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
IhhP97812 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.79■□□□□ 0.92
IhhP97812 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IhhP97812 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
IhhP97812 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.78■□□□□ 0.92
IhhP97812 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
IhhP97812 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
IhhP97812 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IhhP97812 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
IhhP97812 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IhhP97812 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IhhP97812 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
IhhP97812 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
IhhP97812 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IhhP97812 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.77■□□□□ 0.92
IhhP97812 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.77■□□□□ 0.92
IhhP97812 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IhhP97812 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IhhP97812 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
IhhP97812 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
IhhP97812 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IhhP97812 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IhhP97812 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
IhhP97812 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IhhP97812 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
IhhP97812 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms