Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx3-2P97503 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkx3-2P97503 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nkx3-2P97503 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx3-2P97503 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx3-2P97503 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.75■□□□□ 0.59
Nkx3-2P97503 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Spcs1-204ENSMUST00000226782 949 ntBASIC18.75■□□□□ 0.59
Nkx3-2P97503 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx3-2P97503 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.74■□□□□ 0.59
Nkx3-2P97503 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx3-2P97503 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Gm12251-201ENSMUST00000117893 792 ntBASIC18.73■□□□□ 0.59
Nkx3-2P97503 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx3-2P97503 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.72■□□□□ 0.59
Nkx3-2P97503 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Gm43017-201ENSMUST00000198296 752 ntBASIC18.72■□□□□ 0.59
Nkx3-2P97503 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.72■□□□□ 0.59
Nkx3-2P97503 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx3-2P97503 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nkx3-2P97503 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx3-2P97503 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nkx3-2P97503 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx3-2P97503 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx3-2P97503 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx3-2P97503 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx3-2P97503 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Gm18284-201ENSMUST00000172604 624 ntBASIC18.69■□□□□ 0.58
Nkx3-2P97503 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Gm8495-201ENSMUST00000188740 694 ntBASIC18.69■□□□□ 0.58
Nkx3-2P97503 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx3-2P97503 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.68■□□□□ 0.58
Nkx3-2P97503 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nkx3-2P97503 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms