Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh6P97326 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdh6P97326 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh6P97326 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh6P97326 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh6P97326 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh6P97326 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh6P97326 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh6P97326 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh6P97326 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh6P97326 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh6P97326 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cdh6P97326 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh6P97326 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh6P97326 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.2■□□□□ 0.82
Cdh6P97326 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdh6P97326 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cdh6P97326 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh6P97326 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh6P97326 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh6P97326 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh6P97326 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cdh6P97326 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh6P97326 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cdh6P97326 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh6P97326 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh6P97326 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdh6P97326 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh6P97326 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh6P97326 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Cdh6P97326 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh6P97326 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh6P97326 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cdh6P97326 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Cdh6P97326 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cdh6P97326 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cdh6P97326 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.17■□□□□ 0.82
Cdh6P97326 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Cdh6P97326 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.17■□□□□ 0.82
Cdh6P97326 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh6P97326 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.17■□□□□ 0.82
Cdh6P97326 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdh6P97326 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh6P97326 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cdh6P97326 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdh6P97326 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh6P97326 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh6P97326 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.16■□□□□ 0.82
Cdh6P97326 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh6P97326 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh6P97326 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh6P97326 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cdh6P97326 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh6P97326 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh6P97326 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh6P97326 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh6P97326 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Cdh6P97326 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh6P97326 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdh6P97326 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh6P97326 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh6P97326 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cdh6P97326 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh6P97326 Gm12821-201ENSMUST00000120022 600 ntBASIC20.14■□□□□ 0.81
Cdh6P97326 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
Cdh6P97326 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh6P97326 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.14■□□□□ 0.81
Cdh6P97326 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cdh6P97326 Gm43137-201ENSMUST00000198052 594 ntBASIC20.14■□□□□ 0.81
Cdh6P97326 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh6P97326 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh6P97326 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh6P97326 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh6P97326 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.13■□□□□ 0.81
Cdh6P97326 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cdh6P97326 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh6P97326 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh6P97326 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh6P97326 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh6P97326 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.13■□□□□ 0.81
Cdh6P97326 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh6P97326 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh6P97326 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.12■□□□□ 0.81
Cdh6P97326 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms