Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim43cP86449 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.76■■□□□ 1.07
Trim43cP86449 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim43cP86449 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim43cP86449 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim43cP86449 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43cP86449 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim43cP86449 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43cP86449 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43cP86449 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim43cP86449 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43cP86449 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim43cP86449 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43cP86449 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43cP86449 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43cP86449 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43cP86449 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43cP86449 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Trim43cP86449 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim43cP86449 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
Trim43cP86449 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
Trim43cP86449 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim43cP86449 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Trim43cP86449 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim43cP86449 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.71■■□□□ 1.07
Trim43cP86449 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Trim43cP86449 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.71■■□□□ 1.07
Trim43cP86449 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim43cP86449 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim43cP86449 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim43cP86449 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim43cP86449 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Trim43cP86449 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Trim43cP86449 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim43cP86449 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trim43cP86449 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43cP86449 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Trim43cP86449 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43cP86449 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43cP86449 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43cP86449 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim43cP86449 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.7■■□□□ 1.06
Trim43cP86449 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43cP86449 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim43cP86449 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim43cP86449 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim43cP86449 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.69■■□□□ 1.06
Trim43cP86449 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim43cP86449 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim43cP86449 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim43cP86449 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.68■■□□□ 1.06
Trim43cP86449 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.68■■□□□ 1.06
Trim43cP86449 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim43cP86449 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim43cP86449 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43cP86449 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim43cP86449 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim43cP86449 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.67■■□□□ 1.06
Trim43cP86449 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim43cP86449 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.67■■□□□ 1.06
Trim43cP86449 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim43cP86449 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim43cP86449 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.67■■□□□ 1.06
Trim43cP86449 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim43cP86449 Gm13241-201ENSMUST00000094493 780 ntBASIC21.67■■□□□ 1.06
Trim43cP86449 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim43cP86449 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim43cP86449 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.66■■□□□ 1.06
Trim43cP86449 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.66■■□□□ 1.06
Trim43cP86449 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim43cP86449 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Trim43cP86449 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms