Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gbx1P82976 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.72■□□□□ 0.59
Gbx1P82976 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gbx1P82976 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.72■□□□□ 0.59
Gbx1P82976 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gbx1P82976 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.72■□□□□ 0.59
Gbx1P82976 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.72■□□□□ 0.59
Gbx1P82976 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gbx1P82976 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.72■□□□□ 0.59
Gbx1P82976 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gbx1P82976 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gbx1P82976 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gbx1P82976 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gbx1P82976 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Gbx1P82976 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gbx1P82976 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.71■□□□□ 0.59
Gbx1P82976 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gbx1P82976 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gbx1P82976 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gbx1P82976 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gbx1P82976 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gbx1P82976 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gbx1P82976 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gbx1P82976 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Gbx1P82976 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.69■□□□□ 0.58
Gbx1P82976 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Gbx1P82976 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.69■□□□□ 0.58
Gbx1P82976 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gbx1P82976 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gbx1P82976 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 Gm15546-201ENSMUST00000122095 826 ntBASIC18.68■□□□□ 0.58
Gbx1P82976 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.68■□□□□ 0.58
Gbx1P82976 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.68■□□□□ 0.58
Gbx1P82976 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 Gm9870-201ENSMUST00000063874 645 ntBASIC18.68■□□□□ 0.58
Gbx1P82976 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.68■□□□□ 0.58
Gbx1P82976 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.68■□□□□ 0.58
Gbx1P82976 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gbx1P82976 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Gbx1P82976 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gbx1P82976 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gbx1P82976 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gbx1P82976 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gbx1P82976 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gbx1P82976 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gbx1P82976 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Gbx1P82976 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gbx1P82976 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.67■□□□□ 0.58
Gbx1P82976 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gbx1P82976 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gbx1P82976 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.66■□□□□ 0.58
Gbx1P82976 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.66■□□□□ 0.58
Gbx1P82976 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gbx1P82976 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gbx1P82976 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gbx1P82976 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gbx1P82976 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Gbx1P82976 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Gm7417-201ENSMUST00000192950 473 ntBASIC18.65■□□□□ 0.58
Gbx1P82976 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.65■□□□□ 0.58
Gbx1P82976 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gbx1P82976 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gbx1P82976 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gbx1P82976 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Gbx1P82976 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Gm43530-201ENSMUST00000195920 274 ntBASIC18.64■□□□□ 0.57
Gbx1P82976 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Gbx1P82976 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.64■□□□□ 0.57
Gbx1P82976 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gbx1P82976 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gbx1P82976 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gbx1P82976 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gbx1P82976 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gbx1P82976 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms