Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CiitaP79621 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CiitaP79621 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CiitaP79621 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.7■■□□□ 1.06
CiitaP79621 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CiitaP79621 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CiitaP79621 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.7■■□□□ 1.06
CiitaP79621 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CiitaP79621 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CiitaP79621 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CiitaP79621 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CiitaP79621 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Gm18284-201ENSMUST00000172604 624 ntBASIC21.69■■□□□ 1.06
CiitaP79621 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CiitaP79621 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CiitaP79621 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.68■■□□□ 1.06
CiitaP79621 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.68■■□□□ 1.06
CiitaP79621 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CiitaP79621 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CiitaP79621 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CiitaP79621 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CiitaP79621 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CiitaP79621 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CiitaP79621 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CiitaP79621 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 Gm43060-201ENSMUST00000200621 289 ntBASIC21.66■■□□□ 1.06
CiitaP79621 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CiitaP79621 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.65■■□□□ 1.06
CiitaP79621 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.65■■□□□ 1.06
CiitaP79621 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.65■■□□□ 1.06
CiitaP79621 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.65■■□□□ 1.06
CiitaP79621 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
CiitaP79621 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CiitaP79621 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
CiitaP79621 Gm8495-201ENSMUST00000188740 694 ntBASIC21.64■■□□□ 1.05
CiitaP79621 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CiitaP79621 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CiitaP79621 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CiitaP79621 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CiitaP79621 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CiitaP79621 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CiitaP79621 Gm40848-201ENSMUST00000221998 324 ntBASIC21.63■■□□□ 1.05
CiitaP79621 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
CiitaP79621 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CiitaP79621 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CiitaP79621 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.63■■□□□ 1.05
CiitaP79621 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CiitaP79621 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CiitaP79621 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CiitaP79621 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CiitaP79621 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CiitaP79621 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CiitaP79621 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.62■■□□□ 1.05
CiitaP79621 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.62■■□□□ 1.05
CiitaP79621 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CiitaP79621 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CiitaP79621 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CiitaP79621 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
CiitaP79621 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CiitaP79621 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
CiitaP79621 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CiitaP79621 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CiitaP79621 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CiitaP79621 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms