Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Gm43530-201ENSMUST00000195920 274 ntBASIC21.89■■□□□ 1.09
Hmgb1P63158 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgb1P63158 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.89■■□□□ 1.09
Hmgb1P63158 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgb1P63158 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgb1P63158 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgb1P63158 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgb1P63158 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgb1P63158 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Hmgb1P63158 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgb1P63158 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.88■■□□□ 1.09
Hmgb1P63158 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgb1P63158 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgb1P63158 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgb1P63158 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgb1P63158 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgb1P63158 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgb1P63158 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgb1P63158 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgb1P63158 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
Hmgb1P63158 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgb1P63158 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.86■■□□□ 1.09
Hmgb1P63158 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.86■■□□□ 1.09
Hmgb1P63158 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgb1P63158 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgb1P63158 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.85■■□□□ 1.09
Hmgb1P63158 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgb1P63158 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgb1P63158 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgb1P63158 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgb1P63158 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgb1P63158 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.84■■□□□ 1.09
Hmgb1P63158 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Hmgb1P63158 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgb1P63158 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgb1P63158 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Hmgb1P63158 Etf1-202ENSMUST00000180351 108 ntBASIC21.83■■□□□ 1.09
Hmgb1P63158 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.83■■□□□ 1.09
Hmgb1P63158 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
Hmgb1P63158 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Hmgb1P63158 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgb1P63158 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Hmgb1P63158 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgb1P63158 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Hmgb1P63158 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
Hmgb1P63158 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgb1P63158 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hmgb1P63158 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgb1P63158 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgb1P63158 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Hmgb1P63158 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgb1P63158 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Hmgb1P63158 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgb1P63158 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgb1P63158 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgb1P63158 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Hmgb1P63158 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgb1P63158 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.81■■□□□ 1.08
Hmgb1P63158 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.81■■□□□ 1.08
Hmgb1P63158 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgb1P63158 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgb1P63158 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgb1P63158 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgb1P63158 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgb1P63158 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgb1P63158 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgb1P63158 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.8■■□□□ 1.08
Hmgb1P63158 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Hmgb1P63158 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgb1P63158 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgb1P63158 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgb1P63158 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgb1P63158 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgb1P63158 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Hmgb1P63158 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Hmgb1P63158 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgb1P63158 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgb1P63158 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgb1P63158 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgb1P63158 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgb1P63158 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgb1P63158 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgb1P63158 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgb1P63158 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgb1P63158 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Hmgb1P63158 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.77■■□□□ 1.08
Hmgb1P63158 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgb1P63158 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms