Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Lhx1P63006 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Lhx1P63006 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.64■□□□□ 0.73
Lhx1P63006 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lhx1P63006 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx1P63006 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx1P63006 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx1P63006 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx1P63006 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.63■□□□□ 0.73
Lhx1P63006 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Lhx1P63006 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.63■□□□□ 0.73
Lhx1P63006 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx1P63006 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Lhx1P63006 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx1P63006 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx1P63006 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Lhx1P63006 Gm26833-201ENSMUST00000180899 440 ntBASIC19.62■□□□□ 0.73
Lhx1P63006 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.62■□□□□ 0.73
Lhx1P63006 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx1P63006 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx1P63006 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx1P63006 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Lhx1P63006 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.62■□□□□ 0.73
Lhx1P63006 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.62■□□□□ 0.73
Lhx1P63006 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lhx1P63006 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx1P63006 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lhx1P63006 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx1P63006 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx1P63006 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Lhx1P63006 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx1P63006 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx1P63006 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lhx1P63006 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lhx1P63006 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx1P63006 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.6■□□□□ 0.73
Lhx1P63006 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Lhx1P63006 Smad6-203ENSMUST00000179458 273 ntBASIC19.6■□□□□ 0.73
Lhx1P63006 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.6■□□□□ 0.73
Lhx1P63006 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx1P63006 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Lhx1P63006 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lhx1P63006 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx1P63006 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx1P63006 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx1P63006 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx1P63006 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx1P63006 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
Lhx1P63006 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.59■□□□□ 0.73
Lhx1P63006 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lhx1P63006 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx1P63006 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx1P63006 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx1P63006 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx1P63006 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx1P63006 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lhx1P63006 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Lhx1P63006 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
Lhx1P63006 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Lhx1P63006 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx1P63006 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx1P63006 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx1P63006 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx1P63006 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lhx1P63006 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx1P63006 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Lhx1P63006 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx1P63006 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx1P63006 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.57■□□□□ 0.72
Lhx1P63006 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx1P63006 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.57■□□□□ 0.72
Lhx1P63006 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lhx1P63006 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx1P63006 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.57■□□□□ 0.72
Lhx1P63006 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.57■□□□□ 0.72
Lhx1P63006 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lhx1P63006 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lhx1P63006 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lhx1P63006 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Lhx1P63006 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx1P63006 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.55■□□□□ 0.72
Lhx1P63006 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Lhx1P63006 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx1P63006 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx1P63006 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms