Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.17□□□□□ -0.14
Rpl39P62892 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.17□□□□□ -0.14
Rpl39P62892 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39P62892 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39P62892 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Rpl39P62892 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39P62892 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39P62892 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.16□□□□□ -0.14
Rpl39P62892 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rpl39P62892 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rpl39P62892 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Rpl39P62892 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Gm14523-201ENSMUST00000117260 558 ntBASIC14.16□□□□□ -0.14
Rpl39P62892 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rpl39P62892 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39P62892 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.15□□□□□ -0.14
Rpl39P62892 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39P62892 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpl39P62892 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rpl39P62892 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39P62892 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rpl39P62892 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.13□□□□□ -0.15
Rpl39P62892 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Gm7332-201ENSMUST00000118351 454 ntBASIC14.13□□□□□ -0.15
Rpl39P62892 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpl39P62892 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.13□□□□□ -0.15
Rpl39P62892 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rpl39P62892 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39P62892 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rpl39P62892 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.13□□□□□ -0.15
Rpl39P62892 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rpl39P62892 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rpl39P62892 Golph3-205ENSMUST00000228671 2842 ntBASIC14.12□□□□□ -0.15
Rpl39P62892 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39P62892 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rpl39P62892 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rpl39P62892 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39P62892 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rpl39P62892 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpl39P62892 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rpl39P62892 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39P62892 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39P62892 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpl39P62892 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39P62892 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39P62892 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpl39P62892 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpl39P62892 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.11□□□□□ -0.15
Rpl39P62892 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpl39P62892 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39P62892 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rpl39P62892 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms