Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm6P62313 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm6P62313 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm6P62313 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm6P62313 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lsm6P62313 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm6P62313 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm6P62313 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm6P62313 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lsm6P62313 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm6P62313 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lsm6P62313 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lsm6P62313 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm6P62313 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.46■□□□□ 0.39
Lsm6P62313 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm6P62313 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.46■□□□□ 0.39
Lsm6P62313 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.46■□□□□ 0.39
Lsm6P62313 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm6P62313 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm6P62313 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lsm6P62313 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Lsm6P62313 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lsm6P62313 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.45■□□□□ 0.38
Lsm6P62313 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lsm6P62313 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.45■□□□□ 0.38
Lsm6P62313 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm6P62313 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.44■□□□□ 0.38
Lsm6P62313 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Iqck-206ENSMUST00000208658 2891 ntBASIC17.44■□□□□ 0.38
Lsm6P62313 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Gm12922-201ENSMUST00000120626 809 ntBASIC17.44■□□□□ 0.38
Lsm6P62313 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
Lsm6P62313 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lsm6P62313 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lsm6P62313 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm6P62313 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lsm6P62313 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.43■□□□□ 0.38
Lsm6P62313 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.43■□□□□ 0.38
Lsm6P62313 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm6P62313 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.42■□□□□ 0.38
Lsm6P62313 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.42■□□□□ 0.38
Lsm6P62313 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Lsm6P62313 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.42■□□□□ 0.38
Lsm6P62313 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.42■□□□□ 0.38
Lsm6P62313 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm6P62313 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm6P62313 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm6P62313 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm6P62313 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.42■□□□□ 0.38
Lsm6P62313 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.41■□□□□ 0.38
Lsm6P62313 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm6P62313 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lsm6P62313 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm6P62313 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm6P62313 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm6P62313 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm6P62313 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm6P62313 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm6P62313 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Lsm6P62313 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lsm6P62313 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.39■□□□□ 0.37
Lsm6P62313 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm6P62313 Golgb1-201ENSMUST00000023534 498 ntBASIC17.39■□□□□ 0.37
Lsm6P62313 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lsm6P62313 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms