Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.2□□□□□ -0.14
Ube2d3P61079 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.2□□□□□ -0.14
Ube2d3P61079 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d3P61079 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ube2d3P61079 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube2d3P61079 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d3P61079 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.18□□□□□ -0.14
Ube2d3P61079 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube2d3P61079 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube2d3P61079 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube2d3P61079 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ube2d3P61079 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube2d3P61079 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube2d3P61079 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d3P61079 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.18□□□□□ -0.14
Ube2d3P61079 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ube2d3P61079 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube2d3P61079 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ube2d3P61079 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ube2d3P61079 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube2d3P61079 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube2d3P61079 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube2d3P61079 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube2d3P61079 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ube2d3P61079 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Ube2d3P61079 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube2d3P61079 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube2d3P61079 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube2d3P61079 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube2d3P61079 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube2d3P61079 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube2d3P61079 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ube2d3P61079 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube2d3P61079 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube2d3P61079 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube2d3P61079 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube2d3P61079 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube2d3P61079 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.15□□□□□ -0.14
Ube2d3P61079 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.15□□□□□ -0.14
Ube2d3P61079 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube2d3P61079 Gm40881-201ENSMUST00000223397 166 ntBASIC14.15□□□□□ -0.14
Ube2d3P61079 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2d3P61079 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2d3P61079 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2d3P61079 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2d3P61079 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Ube2d3P61079 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2d3P61079 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2d3P61079 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2d3P61079 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2d3P61079 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2d3P61079 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2d3P61079 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube2d3P61079 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2d3P61079 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2d3P61079 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2d3P61079 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2d3P61079 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ube2d3P61079 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube2d3P61079 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.13□□□□□ -0.15
Ube2d3P61079 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.13□□□□□ -0.15
Ube2d3P61079 Gm7143-201ENSMUST00000222811 859 ntBASIC14.13□□□□□ -0.15
Ube2d3P61079 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ube2d3P61079 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms