Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sem1P60897 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sem1P60897 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.96■□□□□ 0.63
Sem1P60897 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sem1P60897 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sem1P60897 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sem1P60897 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sem1P60897 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sem1P60897 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sem1P60897 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sem1P60897 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sem1P60897 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sem1P60897 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sem1P60897 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sem1P60897 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.94■□□□□ 0.62
Sem1P60897 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sem1P60897 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sem1P60897 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sem1P60897 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sem1P60897 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sem1P60897 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sem1P60897 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sem1P60897 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sem1P60897 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sem1P60897 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sem1P60897 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sem1P60897 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sem1P60897 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sem1P60897 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sem1P60897 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sem1P60897 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sem1P60897 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.92■□□□□ 0.62
Sem1P60897 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sem1P60897 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sem1P60897 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sem1P60897 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Sem1P60897 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sem1P60897 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sem1P60897 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sem1P60897 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sem1P60897 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sem1P60897 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sem1P60897 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sem1P60897 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sem1P60897 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sem1P60897 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.89■□□□□ 0.61
Sem1P60897 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sem1P60897 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.89■□□□□ 0.61
Sem1P60897 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sem1P60897 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sem1P60897 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sem1P60897 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sem1P60897 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
Sem1P60897 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sem1P60897 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sem1P60897 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sem1P60897 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sem1P60897 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.88■□□□□ 0.61
Sem1P60897 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.88■□□□□ 0.61
Sem1P60897 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sem1P60897 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sem1P60897 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sem1P60897 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sem1P60897 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sem1P60897 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Sem1P60897 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sem1P60897 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sem1P60897 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Sem1P60897 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.87■□□□□ 0.61
Sem1P60897 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.87■□□□□ 0.61
Sem1P60897 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sem1P60897 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sem1P60897 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.87■□□□□ 0.61
Sem1P60897 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.87■□□□□ 0.61
Sem1P60897 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.86■□□□□ 0.61
Sem1P60897 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms