Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ythdf1P59326 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ythdf1P59326 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ythdf1P59326 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ythdf1P59326 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ythdf1P59326 Gm11599-201ENSMUST00000118720 878 ntBASIC19.19■□□□□ 0.66
Ythdf1P59326 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.19■□□□□ 0.66
Ythdf1P59326 Gm7432-201ENSMUST00000210343 879 ntBASIC19.19■□□□□ 0.66
Ythdf1P59326 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ythdf1P59326 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ythdf1P59326 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ythdf1P59326 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.19■□□□□ 0.66
Ythdf1P59326 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ythdf1P59326 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ythdf1P59326 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
Ythdf1P59326 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ythdf1P59326 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.17■□□□□ 0.66
Ythdf1P59326 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ythdf1P59326 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.17■□□□□ 0.66
Ythdf1P59326 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ythdf1P59326 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ythdf1P59326 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.16■□□□□ 0.66
Ythdf1P59326 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.16■□□□□ 0.66
Ythdf1P59326 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Ythdf1P59326 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ythdf1P59326 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.16■□□□□ 0.66
Ythdf1P59326 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ythdf1P59326 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ythdf1P59326 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.16■□□□□ 0.66
Ythdf1P59326 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ythdf1P59326 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ythdf1P59326 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ythdf1P59326 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Ythdf1P59326 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ythdf1P59326 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.15■□□□□ 0.66
Ythdf1P59326 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.15■□□□□ 0.66
Ythdf1P59326 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ythdf1P59326 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.15■□□□□ 0.66
Ythdf1P59326 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ythdf1P59326 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ythdf1P59326 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ythdf1P59326 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ythdf1P59326 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ythdf1P59326 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Ythdf1P59326 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ythdf1P59326 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ythdf1P59326 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ythdf1P59326 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ythdf1P59326 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ythdf1P59326 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ythdf1P59326 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ythdf1P59326 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ythdf1P59326 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ythdf1P59326 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ythdf1P59326 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ythdf1P59326 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.13■□□□□ 0.65
Ythdf1P59326 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ythdf1P59326 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ythdf1P59326 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ythdf1P59326 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ythdf1P59326 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ythdf1P59326 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.12■□□□□ 0.65
Ythdf1P59326 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ythdf1P59326 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ythdf1P59326 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ythdf1P59326 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ythdf1P59326 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ythdf1P59326 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.12■□□□□ 0.65
Ythdf1P59326 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.12■□□□□ 0.65
Ythdf1P59326 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ythdf1P59326 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ythdf1P59326 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ythdf1P59326 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ythdf1P59326 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms