Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ddx6P54823 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx6P54823 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.35■□□□□ 0.85
Ddx6P54823 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx6P54823 AV356131-201ENSMUST00000206201 750 ntBASIC20.35■□□□□ 0.85
Ddx6P54823 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx6P54823 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ddx6P54823 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx6P54823 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx6P54823 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx6P54823 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Ddx6P54823 Gm27801-201ENSMUST00000184174 223 ntBASIC20.34■□□□□ 0.85
Ddx6P54823 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx6P54823 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx6P54823 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ddx6P54823 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx6P54823 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx6P54823 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx6P54823 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx6P54823 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx6P54823 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Ddx6P54823 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Ddx6P54823 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.33■□□□□ 0.84
Ddx6P54823 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx6P54823 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx6P54823 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
Ddx6P54823 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ddx6P54823 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx6P54823 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx6P54823 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx6P54823 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.32■□□□□ 0.84
Ddx6P54823 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx6P54823 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx6P54823 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx6P54823 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx6P54823 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx6P54823 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx6P54823 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx6P54823 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ddx6P54823 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx6P54823 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.31■□□□□ 0.84
Ddx6P54823 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
Ddx6P54823 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.3■□□□□ 0.84
Ddx6P54823 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx6P54823 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx6P54823 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx6P54823 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.29■□□□□ 0.84
Ddx6P54823 Gm29257-201ENSMUST00000186115 639 ntBASIC20.29■□□□□ 0.84
Ddx6P54823 Gm37179-201ENSMUST00000194862 823 ntBASIC20.29■□□□□ 0.84
Ddx6P54823 Gm9988-201ENSMUST00000069786 435 ntBASIC20.29■□□□□ 0.84
Ddx6P54823 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx6P54823 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ddx6P54823 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx6P54823 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx6P54823 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ddx6P54823 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ddx6P54823 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx6P54823 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.27■□□□□ 0.84
Ddx6P54823 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx6P54823 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.27■□□□□ 0.84
Ddx6P54823 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx6P54823 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Ddx6P54823 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.27■□□□□ 0.84
Ddx6P54823 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx6P54823 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx6P54823 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx6P54823 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.27■□□□□ 0.84
Ddx6P54823 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx6P54823 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ddx6P54823 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.26■□□□□ 0.83
Ddx6P54823 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx6P54823 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx6P54823 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx6P54823 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx6P54823 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ddx6P54823 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms