Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atxn1P54254 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atxn1P54254 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Atxn1P54254 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
Atxn1P54254 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Atxn1P54254 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Atxn1P54254 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.76■□□□□ 0.75
Atxn1P54254 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Atxn1P54254 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atxn1P54254 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atxn1P54254 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atxn1P54254 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atxn1P54254 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atxn1P54254 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.75■□□□□ 0.75
Atxn1P54254 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Atxn1P54254 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atxn1P54254 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atxn1P54254 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atxn1P54254 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atxn1P54254 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.74■□□□□ 0.75
Atxn1P54254 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Atxn1P54254 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Atxn1P54254 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atxn1P54254 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atxn1P54254 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atxn1P54254 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.73■□□□□ 0.75
Atxn1P54254 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.73■□□□□ 0.75
Atxn1P54254 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.73■□□□□ 0.75
Atxn1P54254 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.73■□□□□ 0.75
Atxn1P54254 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.73■□□□□ 0.75
Atxn1P54254 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.73■□□□□ 0.75
Atxn1P54254 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Atxn1P54254 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atxn1P54254 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Atxn1P54254 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atxn1P54254 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atxn1P54254 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Atxn1P54254 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atxn1P54254 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atxn1P54254 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atxn1P54254 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atxn1P54254 Gm12441-201ENSMUST00000121806 588 ntBASIC19.71■□□□□ 0.75
Atxn1P54254 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Atxn1P54254 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atxn1P54254 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.71■□□□□ 0.75
Atxn1P54254 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atxn1P54254 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.7■□□□□ 0.74
Atxn1P54254 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.7■□□□□ 0.74
Atxn1P54254 Gm22240-201ENSMUST00000175225 82 ntBASIC19.7■□□□□ 0.74
Atxn1P54254 Mir7071-201ENSMUST00000184847 69 ntBASIC19.7■□□□□ 0.74
Atxn1P54254 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atxn1P54254 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.7■□□□□ 0.74
Atxn1P54254 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atxn1P54254 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Atxn1P54254 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atxn1P54254 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atxn1P54254 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atxn1P54254 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atxn1P54254 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Atxn1P54254 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.69■□□□□ 0.74
Atxn1P54254 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Atxn1P54254 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atxn1P54254 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Atxn1P54254 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atxn1P54254 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atxn1P54254 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.69■□□□□ 0.74
Atxn1P54254 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atxn1P54254 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atxn1P54254 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atxn1P54254 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Atxn1P54254 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atxn1P54254 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atxn1P54254 Gm43530-201ENSMUST00000195920 274 ntBASIC19.68■□□□□ 0.74
Atxn1P54254 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.68■□□□□ 0.74
Atxn1P54254 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atxn1P54254 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Atxn1P54254 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.68■□□□□ 0.74
Atxn1P54254 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atxn1P54254 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Atxn1P54254 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.67■□□□□ 0.74
Atxn1P54254 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.67■□□□□ 0.74
Atxn1P54254 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atxn1P54254 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms