Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx4P53776 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Lhx4P53776 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx4P53776 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Lhx4P53776 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx4P53776 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Lhx4P53776 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Lhx4P53776 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.74■□□□□ 0.27
Lhx4P53776 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.74■□□□□ 0.27
Lhx4P53776 Gm21956-201ENSMUST00000179946 522 ntBASIC16.74■□□□□ 0.27
Lhx4P53776 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.74■□□□□ 0.27
Lhx4P53776 Golgb1-201ENSMUST00000023534 498 ntBASIC16.74■□□□□ 0.27
Lhx4P53776 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.74■□□□□ 0.27
Lhx4P53776 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx4P53776 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lhx4P53776 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Lhx4P53776 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Lhx4P53776 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Lhx4P53776 Gm9870-201ENSMUST00000063874 645 ntBASIC16.73■□□□□ 0.27
Lhx4P53776 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lhx4P53776 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx4P53776 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lhx4P53776 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.72■□□□□ 0.27
Lhx4P53776 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.72■□□□□ 0.27
Lhx4P53776 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx4P53776 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx4P53776 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx4P53776 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx4P53776 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx4P53776 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx4P53776 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.71■□□□□ 0.27
Lhx4P53776 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx4P53776 Gm7143-201ENSMUST00000222811 859 ntBASIC16.71■□□□□ 0.27
Lhx4P53776 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx4P53776 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Lhx4P53776 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.7■□□□□ 0.26
Lhx4P53776 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lhx4P53776 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lhx4P53776 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lhx4P53776 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx4P53776 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.69■□□□□ 0.26
Lhx4P53776 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx4P53776 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx4P53776 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lhx4P53776 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx4P53776 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Lhx4P53776 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx4P53776 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lhx4P53776 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx4P53776 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx4P53776 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx4P53776 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.68■□□□□ 0.26
Lhx4P53776 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx4P53776 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms