Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pdx1P52946 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.72■□□□□ 0.75
Pdx1P52946 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pdx1P52946 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.72■□□□□ 0.75
Pdx1P52946 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.72■□□□□ 0.75
Pdx1P52946 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pdx1P52946 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdx1P52946 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pdx1P52946 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdx1P52946 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdx1P52946 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdx1P52946 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.71■□□□□ 0.75
Pdx1P52946 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Pdx1P52946 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Pdx1P52946 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdx1P52946 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pdx1P52946 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.7■□□□□ 0.74
Pdx1P52946 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pdx1P52946 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pdx1P52946 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.7■□□□□ 0.74
Pdx1P52946 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdx1P52946 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pdx1P52946 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pdx1P52946 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.69■□□□□ 0.74
Pdx1P52946 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.69■□□□□ 0.74
Pdx1P52946 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdx1P52946 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdx1P52946 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdx1P52946 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdx1P52946 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pdx1P52946 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pdx1P52946 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
Pdx1P52946 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Pdx1P52946 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdx1P52946 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdx1P52946 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdx1P52946 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdx1P52946 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pdx1P52946 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdx1P52946 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.67■□□□□ 0.74
Pdx1P52946 Gm43137-201ENSMUST00000198052 594 ntBASIC19.67■□□□□ 0.74
Pdx1P52946 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pdx1P52946 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdx1P52946 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.67■□□□□ 0.74
Pdx1P52946 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pdx1P52946 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pdx1P52946 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.66■□□□□ 0.74
Pdx1P52946 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.66■□□□□ 0.74
Pdx1P52946 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pdx1P52946 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pdx1P52946 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Pdx1P52946 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.65■□□□□ 0.74
Pdx1P52946 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pdx1P52946 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pdx1P52946 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.65■□□□□ 0.74
Pdx1P52946 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pdx1P52946 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms