Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nek1P51954 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nek1P51954 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nek1P51954 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nek1P51954 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Nek1P51954 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nek1P51954 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.2■■□□□ 1.15
Nek1P51954 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nek1P51954 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Nek1P51954 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nek1P51954 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.2■■□□□ 1.14
Nek1P51954 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.2■■□□□ 1.14
Nek1P51954 Serp2-204ENSMUST00000228055 705 ntBASIC22.2■■□□□ 1.14
Nek1P51954 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Nek1P51954 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nek1P51954 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nek1P51954 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.2■■□□□ 1.14
Nek1P51954 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Nek1P51954 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Nek1P51954 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Nek1P51954 Gm7143-201ENSMUST00000222811 859 ntBASIC22.19■■□□□ 1.14
Nek1P51954 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nek1P51954 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nek1P51954 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nek1P51954 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nek1P51954 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nek1P51954 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nek1P51954 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nek1P51954 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
Nek1P51954 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.18■■□□□ 1.14
Nek1P51954 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Nek1P51954 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nek1P51954 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nek1P51954 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Nek1P51954 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.17■■□□□ 1.14
Nek1P51954 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nek1P51954 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Nek1P51954 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.17■■□□□ 1.14
Nek1P51954 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Nek1P51954 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nek1P51954 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.17■■□□□ 1.14
Nek1P51954 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nek1P51954 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nek1P51954 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Nek1P51954 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Nek1P51954 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nek1P51954 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.16■■□□□ 1.14
Nek1P51954 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Nek1P51954 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Nek1P51954 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Nek1P51954 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nek1P51954 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Nek1P51954 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Nek1P51954 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.15■■□□□ 1.14
Nek1P51954 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.15■■□□□ 1.14
Nek1P51954 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nek1P51954 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nek1P51954 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Nek1P51954 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Nek1P51954 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nek1P51954 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
Nek1P51954 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.14■■□□□ 1.13
Nek1P51954 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Nek1P51954 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.14■■□□□ 1.13
Nek1P51954 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nek1P51954 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nek1P51954 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Nek1P51954 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nek1P51954 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nek1P51954 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nek1P51954 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.13■■□□□ 1.13
Nek1P51954 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Nek1P51954 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nek1P51954 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nek1P51954 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Nek1P51954 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Nek1P51954 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.12■■□□□ 1.13
Nek1P51954 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.12■■□□□ 1.13
Nek1P51954 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nek1P51954 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Nek1P51954 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nek1P51954 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nek1P51954 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nek1P51954 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nek1P51954 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
Nek1P51954 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nek1P51954 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nek1P51954 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Nek1P51954 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nek1P51954 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms