Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RoraP51448 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RoraP51448 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.82■□□□□ 0.6
RoraP51448 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.82■□□□□ 0.6
RoraP51448 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RoraP51448 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RoraP51448 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
RoraP51448 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Gm26833-201ENSMUST00000180899 440 ntBASIC18.81■□□□□ 0.6
RoraP51448 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.81■□□□□ 0.6
RoraP51448 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RoraP51448 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RoraP51448 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.8■□□□□ 0.6
RoraP51448 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RoraP51448 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RoraP51448 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.8■□□□□ 0.6
RoraP51448 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RoraP51448 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RoraP51448 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RoraP51448 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RoraP51448 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
RoraP51448 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RoraP51448 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
RoraP51448 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.79■□□□□ 0.6
RoraP51448 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
RoraP51448 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RoraP51448 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RoraP51448 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RoraP51448 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RoraP51448 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.78■□□□□ 0.6
RoraP51448 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RoraP51448 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RoraP51448 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RoraP51448 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RoraP51448 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RoraP51448 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RoraP51448 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RoraP51448 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RoraP51448 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
RoraP51448 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RoraP51448 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RoraP51448 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RoraP51448 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RoraP51448 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RoraP51448 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RoraP51448 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
RoraP51448 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RoraP51448 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RoraP51448 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RoraP51448 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.76■□□□□ 0.59
RoraP51448 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RoraP51448 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RoraP51448 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RoraP51448 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RoraP51448 Smad6-203ENSMUST00000179458 273 ntBASIC18.76■□□□□ 0.59
RoraP51448 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RoraP51448 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RoraP51448 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RoraP51448 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Gm43060-201ENSMUST00000200621 289 ntBASIC18.75■□□□□ 0.59
RoraP51448 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.75■□□□□ 0.59
RoraP51448 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RoraP51448 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RoraP51448 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms