Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.36■□□□□ 0.85
SftpbP50405 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SftpbP50405 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.34■□□□□ 0.85
SftpbP50405 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SftpbP50405 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SftpbP50405 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SftpbP50405 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SftpbP50405 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SftpbP50405 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SftpbP50405 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SftpbP50405 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SftpbP50405 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SftpbP50405 Gm40881-201ENSMUST00000223397 166 ntBASIC20.33■□□□□ 0.85
SftpbP50405 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SftpbP50405 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SftpbP50405 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SftpbP50405 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SftpbP50405 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.32■□□□□ 0.84
SftpbP50405 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SftpbP50405 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.32■□□□□ 0.84
SftpbP50405 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SftpbP50405 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SftpbP50405 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SftpbP50405 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SftpbP50405 Gm7143-201ENSMUST00000222811 859 ntBASIC20.31■□□□□ 0.84
SftpbP50405 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.31■□□□□ 0.84
SftpbP50405 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.31■□□□□ 0.84
SftpbP50405 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SftpbP50405 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SftpbP50405 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SftpbP50405 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.3■□□□□ 0.84
SftpbP50405 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.3■□□□□ 0.84
SftpbP50405 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SftpbP50405 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SftpbP50405 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SftpbP50405 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SftpbP50405 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.29■□□□□ 0.84
SftpbP50405 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SftpbP50405 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SftpbP50405 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SftpbP50405 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SftpbP50405 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.28■□□□□ 0.84
SftpbP50405 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SftpbP50405 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SftpbP50405 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SftpbP50405 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.28■□□□□ 0.84
SftpbP50405 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SftpbP50405 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.27■□□□□ 0.84
SftpbP50405 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SftpbP50405 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SftpbP50405 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.27■□□□□ 0.84
SftpbP50405 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SftpbP50405 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.27■□□□□ 0.84
SftpbP50405 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SftpbP50405 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SftpbP50405 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SftpbP50405 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SftpbP50405 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SftpbP50405 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SftpbP50405 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.26■□□□□ 0.83
SftpbP50405 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SftpbP50405 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SftpbP50405 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SftpbP50405 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.26■□□□□ 0.83
SftpbP50405 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.26■□□□□ 0.83
SftpbP50405 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SftpbP50405 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms