Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-2P42586 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-2P42586 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-2P42586 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-2P42586 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Nkx2-2P42586 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-2P42586 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-2P42586 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-2P42586 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-2P42586 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-2P42586 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.33■□□□□ 0.52
Nkx2-2P42586 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-2P42586 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nkx2-2P42586 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nkx2-2P42586 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.33■□□□□ 0.52
Nkx2-2P42586 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.33■□□□□ 0.52
Nkx2-2P42586 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-2P42586 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-2P42586 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.32■□□□□ 0.52
Nkx2-2P42586 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-2P42586 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Gm13241-201ENSMUST00000094493 780 ntBASIC18.31■□□□□ 0.52
Nkx2-2P42586 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx2-2P42586 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-2P42586 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-2P42586 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.3■□□□□ 0.52
Nkx2-2P42586 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Nkx2-2P42586 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-2P42586 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Nkx2-2P42586 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-2P42586 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.29■□□□□ 0.52
Nkx2-2P42586 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-2P42586 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-2P42586 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-2P42586 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-2P42586 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-2P42586 Gm21956-201ENSMUST00000179946 522 ntBASIC18.27■□□□□ 0.52
Nkx2-2P42586 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-2P42586 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-2P42586 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-2P42586 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-2P42586 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-2P42586 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-2P42586 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Nkx2-2P42586 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nkx2-2P42586 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-2P42586 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Nkx2-2P42586 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-2P42586 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-2P42586 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.26■□□□□ 0.51
Nkx2-2P42586 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-2P42586 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-2P42586 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-2P42586 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-2P42586 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-2P42586 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.25■□□□□ 0.51
Nkx2-2P42586 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-2P42586 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-2P42586 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.25■□□□□ 0.51
Nkx2-2P42586 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms