Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HmgclP38060 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.68■□□□□ 0.74
HmgclP38060 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.68■□□□□ 0.74
HmgclP38060 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HmgclP38060 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HmgclP38060 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HmgclP38060 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HmgclP38060 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HmgclP38060 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
HmgclP38060 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
HmgclP38060 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HmgclP38060 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HmgclP38060 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HmgclP38060 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.67■□□□□ 0.74
HmgclP38060 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
HmgclP38060 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HmgclP38060 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HmgclP38060 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HmgclP38060 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HmgclP38060 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HmgclP38060 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HmgclP38060 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.66■□□□□ 0.74
HmgclP38060 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.66■□□□□ 0.74
HmgclP38060 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HmgclP38060 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HmgclP38060 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.65■□□□□ 0.74
HmgclP38060 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HmgclP38060 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HmgclP38060 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.65■□□□□ 0.74
HmgclP38060 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HmgclP38060 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HmgclP38060 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.64■□□□□ 0.73
HmgclP38060 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HmgclP38060 Gm21956-201ENSMUST00000179946 522 ntBASIC19.64■□□□□ 0.73
HmgclP38060 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HmgclP38060 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HmgclP38060 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HmgclP38060 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HmgclP38060 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HmgclP38060 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HmgclP38060 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HmgclP38060 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.63■□□□□ 0.73
HmgclP38060 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.63■□□□□ 0.73
HmgclP38060 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HmgclP38060 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
HmgclP38060 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HmgclP38060 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
HmgclP38060 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HmgclP38060 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.61■□□□□ 0.73
HmgclP38060 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.61■□□□□ 0.73
HmgclP38060 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.61■□□□□ 0.73
HmgclP38060 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.61■□□□□ 0.73
HmgclP38060 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HmgclP38060 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.61■□□□□ 0.73
HmgclP38060 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HmgclP38060 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
HmgclP38060 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HmgclP38060 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HmgclP38060 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HmgclP38060 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HmgclP38060 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
HmgclP38060 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HmgclP38060 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HmgclP38060 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HmgclP38060 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HmgclP38060 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HmgclP38060 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HmgclP38060 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HmgclP38060 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HmgclP38060 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HmgclP38060 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HmgclP38060 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HmgclP38060 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HmgclP38060 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms